Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CQD03322.1 | CQD12924.1 | BN1232_00398 | BN1232_02491 | mmgE/PrpD family protein. | Aconitate hydratase. | 0.518 |
CQD03322.1 | CQD19690.1 | BN1232_00398 | BN1232_04639 | mmgE/PrpD family protein. | MmgE/PrpD family protein. | 0.875 |
CQD03322.1 | CQD22848.1 | BN1232_00398 | BN1232_05759 | mmgE/PrpD family protein. | Aconitate hydratase. | 0.518 |
CQD03322.1 | gltA1 | BN1232_00398 | BN1232_04637 | mmgE/PrpD family protein. | Citrate synthase; Belongs to the citrate synthase family. | 0.986 |
CQD03322.1 | mdh | BN1232_00398 | BN1232_04515 | mmgE/PrpD family protein. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.497 |
CQD03322.1 | prpB | BN1232_00398 | BN1232_04638 | mmgE/PrpD family protein. | Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. | 0.954 |
CQD03322.1 | sucC | BN1232_00398 | BN1232_04866 | mmgE/PrpD family protein. | succinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.640 |
CQD12924.1 | CQD03322.1 | BN1232_02491 | BN1232_00398 | Aconitate hydratase. | mmgE/PrpD family protein. | 0.518 |
CQD12924.1 | CQD19299.1 | BN1232_02491 | BN1232_04510 | Aconitate hydratase. | Alpha-ketoglutarate decarboxylase. | 0.834 |
CQD12924.1 | CQD19690.1 | BN1232_02491 | BN1232_04639 | Aconitate hydratase. | MmgE/PrpD family protein. | 0.518 |
CQD12924.1 | CQD22848.1 | BN1232_02491 | BN1232_05759 | Aconitate hydratase. | Aconitate hydratase. | 0.918 |
CQD12924.1 | fumC | BN1232_02491 | BN1232_04675 | Aconitate hydratase. | Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.732 |
CQD12924.1 | glcB | BN1232_02491 | BN1232_02958 | Aconitate hydratase. | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.623 |
CQD12924.1 | gltA1 | BN1232_02491 | BN1232_04637 | Aconitate hydratase. | Citrate synthase; Belongs to the citrate synthase family. | 0.994 |
CQD12924.1 | mdh | BN1232_02491 | BN1232_04515 | Aconitate hydratase. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.630 |
CQD12924.1 | prpB | BN1232_02491 | BN1232_04638 | Aconitate hydratase. | Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. | 0.612 |
CQD12924.1 | sucC | BN1232_02491 | BN1232_04866 | Aconitate hydratase. | succinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.733 |
CQD19299.1 | CQD12924.1 | BN1232_04510 | BN1232_02491 | Alpha-ketoglutarate decarboxylase. | Aconitate hydratase. | 0.834 |
CQD19299.1 | CQD22848.1 | BN1232_04510 | BN1232_05759 | Alpha-ketoglutarate decarboxylase. | Aconitate hydratase. | 0.798 |
CQD19299.1 | fumC | BN1232_04510 | BN1232_04675 | Alpha-ketoglutarate decarboxylase. | Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.948 |
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