STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQD20238.1acyl-CoA dehydrogenase fadE12. (388 aa)    
Predicted Functional Partners:
accA2
propionyl-CoA carboxylase subunit alpha.
 
 
 0.970
CQD20234.1
acetyl-CoA carboxylase, carboxyl transferase subunit alpha.
 
 
 0.969
CQD20240.1
enoyl-CoA hydratase.
  
 0.928
fadE13
acyl-CoA dehydrogenase FadE13.
 
   
0.921
CQD20231.1
Hypothetical protein.
 
    0.804
fixB
Electron transfer flavoprotein subunit alpha.
 
 0.786
CQD24398.1
Carboxyl transferase.
  
 
 0.783
fixA
Electron transfer flavoprotein subunit beta.
 
 
 0.772
CQD15500.1
Erythronolide synthase, modules 3 and 4.
  
 0.770
CQD20583.1
acyl-CoA dehydrogenase.
  
 0.741
Your Current Organism:
Mycobacterium lentiflavum
NCBI taxonomy Id: 141349
Other names: ATCC 51985, CCUG 42422, CCUG 42559, CIP 105465, DSM 44418, JCM 13390, M. lentiflavum, strain 2186/92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.