STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQD20721.14-carboxymuconolactone decarboxylase. (128 aa)    
Predicted Functional Partners:
CQD21243.1
4-carboxymuconolactone decarboxylase.
  
  
  0.941
CQD20724.1
3-hydroxyisobutyrate dehydrogenase.
 
 
  0.926
CQD04899.1
succinyl-CoA:3-ketoacid-coenzyme A transferase 1; Belongs to the 3-oxoacid CoA-transferase family.
 
 
 0.875
CQD19734.1
Gamma-carboxymuconolactone decarboxylase subunit like protein.
  
  
 
0.868
CQD16529.1
Hypothetical protein.
    
 0.852
CQD13144.1
Carboxymuconolactone decarboxylase.
    
 0.786
CQD24102.1
Carboxymuconolactone decarboxylase.
    
 0.786
CQD16532.1
Intradiol ring-cleavage dioxygenase.
 
 
 0.732
CQD14813.1
Alpha/beta hydrolase.
 
   
  0.697
CQD20797.1
Carboxymuconolactone decarboxylase.
    
 0.686
Your Current Organism:
Mycobacterium lentiflavum
NCBI taxonomy Id: 141349
Other names: ATCC 51985, CCUG 42422, CCUG 42559, CIP 105465, DSM 44418, JCM 13390, M. lentiflavum, strain 2186/92
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