Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CQD04899.1 | CQD14813.1 | BN1232_00800 | BN1232_03145 | succinyl-CoA:3-ketoacid-coenzyme A transferase 1; Belongs to the 3-oxoacid CoA-transferase family. | Alpha/beta hydrolase. | 0.456 |
CQD04899.1 | CQD16532.1 | BN1232_00800 | BN1232_03578 | succinyl-CoA:3-ketoacid-coenzyme A transferase 1; Belongs to the 3-oxoacid CoA-transferase family. | Intradiol ring-cleavage dioxygenase. | 0.928 |
CQD04899.1 | CQD19734.1 | BN1232_00800 | BN1232_04654 | succinyl-CoA:3-ketoacid-coenzyme A transferase 1; Belongs to the 3-oxoacid CoA-transferase family. | Gamma-carboxymuconolactone decarboxylase subunit like protein. | 0.871 |
CQD04899.1 | CQD20721.1 | BN1232_00800 | BN1232_05018 | succinyl-CoA:3-ketoacid-coenzyme A transferase 1; Belongs to the 3-oxoacid CoA-transferase family. | 4-carboxymuconolactone decarboxylase. | 0.875 |
CQD04899.1 | CQD20724.1 | BN1232_00800 | BN1232_05019 | succinyl-CoA:3-ketoacid-coenzyme A transferase 1; Belongs to the 3-oxoacid CoA-transferase family. | 3-hydroxyisobutyrate dehydrogenase. | 0.423 |
CQD04899.1 | CQD21243.1 | BN1232_00800 | BN1232_05199 | succinyl-CoA:3-ketoacid-coenzyme A transferase 1; Belongs to the 3-oxoacid CoA-transferase family. | 4-carboxymuconolactone decarboxylase. | 0.853 |
CQD13144.1 | CQD19734.1 | BN1232_02551 | BN1232_04654 | Carboxymuconolactone decarboxylase. | Gamma-carboxymuconolactone decarboxylase subunit like protein. | 0.741 |
CQD13144.1 | CQD20721.1 | BN1232_02551 | BN1232_05018 | Carboxymuconolactone decarboxylase. | 4-carboxymuconolactone decarboxylase. | 0.786 |
CQD13144.1 | CQD21243.1 | BN1232_02551 | BN1232_05199 | Carboxymuconolactone decarboxylase. | 4-carboxymuconolactone decarboxylase. | 0.805 |
CQD14813.1 | CQD04899.1 | BN1232_03145 | BN1232_00800 | Alpha/beta hydrolase. | succinyl-CoA:3-ketoacid-coenzyme A transferase 1; Belongs to the 3-oxoacid CoA-transferase family. | 0.456 |
CQD14813.1 | CQD20721.1 | BN1232_03145 | BN1232_05018 | Alpha/beta hydrolase. | 4-carboxymuconolactone decarboxylase. | 0.697 |
CQD16529.1 | CQD16532.1 | BN1232_03577 | BN1232_03578 | Hypothetical protein. | Intradiol ring-cleavage dioxygenase. | 0.785 |
CQD16529.1 | CQD19734.1 | BN1232_03577 | BN1232_04654 | Hypothetical protein. | Gamma-carboxymuconolactone decarboxylase subunit like protein. | 0.786 |
CQD16529.1 | CQD20721.1 | BN1232_03577 | BN1232_05018 | Hypothetical protein. | 4-carboxymuconolactone decarboxylase. | 0.852 |
CQD16529.1 | CQD21243.1 | BN1232_03577 | BN1232_05199 | Hypothetical protein. | 4-carboxymuconolactone decarboxylase. | 0.864 |
CQD16532.1 | CQD04899.1 | BN1232_03578 | BN1232_00800 | Intradiol ring-cleavage dioxygenase. | succinyl-CoA:3-ketoacid-coenzyme A transferase 1; Belongs to the 3-oxoacid CoA-transferase family. | 0.928 |
CQD16532.1 | CQD16529.1 | BN1232_03578 | BN1232_03577 | Intradiol ring-cleavage dioxygenase. | Hypothetical protein. | 0.785 |
CQD16532.1 | CQD19734.1 | BN1232_03578 | BN1232_04654 | Intradiol ring-cleavage dioxygenase. | Gamma-carboxymuconolactone decarboxylase subunit like protein. | 0.657 |
CQD16532.1 | CQD20721.1 | BN1232_03578 | BN1232_05018 | Intradiol ring-cleavage dioxygenase. | 4-carboxymuconolactone decarboxylase. | 0.732 |
CQD16532.1 | CQD21243.1 | BN1232_03578 | BN1232_05199 | Intradiol ring-cleavage dioxygenase. | 4-carboxymuconolactone decarboxylase. | 0.479 |
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