Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CQD13934.1 | CQD13938.1 | BN1232_02857 | BN1232_02858 | Fatty-acid-coa ligase FadD. | fadD9. | 0.990 |
CQD13934.1 | CQD15358.1 | BN1232_02857 | BN1232_03284 | Fatty-acid-coa ligase FadD. | Hydrogen dehydrogenase. | 0.998 |
CQD13934.1 | CQD20742.1 | BN1232_02857 | BN1232_05025 | Fatty-acid-coa ligase FadD. | Respiratory-chain NADH dehydrogenase 51 kd subunit family protein. | 0.856 |
CQD13934.1 | CQD21653.1 | BN1232_02857 | BN1232_05337 | Fatty-acid-coa ligase FadD. | Lipocalin. | 0.907 |
CQD13934.1 | CQD22949.1 | BN1232_02857 | BN1232_05799 | Fatty-acid-coa ligase FadD. | NADH-quinone oxidoreductase subunit E. | 0.895 |
CQD13934.1 | CQD22951.1 | BN1232_02857 | BN1232_05800 | Fatty-acid-coa ligase FadD. | NADH-quinone oxidoreductase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.856 |
CQD13934.1 | nuoD | BN1232_02857 | BN1232_01599 | Fatty-acid-coa ligase FadD. | NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. | 0.896 |
CQD13934.1 | nuoD-2 | BN1232_02857 | BN1232_05798 | Fatty-acid-coa ligase FadD. | NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. | 0.896 |
CQD13934.1 | nuoE | BN1232_02857 | BN1232_01598 | Fatty-acid-coa ligase FadD. | NADH dehydrogenase I subunit E. | 0.895 |
CQD13934.1 | nuoF | BN1232_02857 | BN1232_01597 | Fatty-acid-coa ligase FadD. | NADH dehydrogenase I subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.856 |
CQD13938.1 | CQD13934.1 | BN1232_02858 | BN1232_02857 | fadD9. | Fatty-acid-coa ligase FadD. | 0.990 |
CQD13938.1 | CQD15358.1 | BN1232_02858 | BN1232_03284 | fadD9. | Hydrogen dehydrogenase. | 0.998 |
CQD13938.1 | CQD20742.1 | BN1232_02858 | BN1232_05025 | fadD9. | Respiratory-chain NADH dehydrogenase 51 kd subunit family protein. | 0.856 |
CQD13938.1 | CQD21653.1 | BN1232_02858 | BN1232_05337 | fadD9. | Lipocalin. | 0.907 |
CQD13938.1 | CQD22949.1 | BN1232_02858 | BN1232_05799 | fadD9. | NADH-quinone oxidoreductase subunit E. | 0.895 |
CQD13938.1 | CQD22951.1 | BN1232_02858 | BN1232_05800 | fadD9. | NADH-quinone oxidoreductase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.856 |
CQD13938.1 | nuoD | BN1232_02858 | BN1232_01599 | fadD9. | NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. | 0.896 |
CQD13938.1 | nuoD-2 | BN1232_02858 | BN1232_05798 | fadD9. | NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. | 0.896 |
CQD13938.1 | nuoE | BN1232_02858 | BN1232_01598 | fadD9. | NADH dehydrogenase I subunit E. | 0.895 |
CQD13938.1 | nuoF | BN1232_02858 | BN1232_01597 | fadD9. | NADH dehydrogenase I subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.856 |
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