Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CQD04304.1 | CQD06436.1 | BN1232_00649 | BN1232_01113 | Nitrite reductase [NAD(P)H], large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Ferredoxin reductase. | 0.807 |
CQD04304.1 | CQD08626.1 | BN1232_00649 | BN1232_01553 | Nitrite reductase [NAD(P)H], large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | FAD-dependent pyridine nucleotide-disulfide oxidoreductase. | 0.820 |
CQD04304.1 | CQD22719.1 | BN1232_00649 | BN1232_05715 | Nitrite reductase [NAD(P)H], large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Rieske (2Fe-2S) domain-containing protein. | 0.960 |
CQD04304.1 | CQD23951.1 | BN1232_00649 | BN1232_05963 | Nitrite reductase [NAD(P)H], large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | FAD-dependent pyridine nucleotide-disulfide oxidoreductase. | 0.805 |
CQD06436.1 | CQD04304.1 | BN1232_01113 | BN1232_00649 | Ferredoxin reductase. | Nitrite reductase [NAD(P)H], large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.807 |
CQD06436.1 | CQD08626.1 | BN1232_01113 | BN1232_01553 | Ferredoxin reductase. | FAD-dependent pyridine nucleotide-disulfide oxidoreductase. | 0.830 |
CQD06436.1 | CQD22719.1 | BN1232_01113 | BN1232_05715 | Ferredoxin reductase. | Rieske (2Fe-2S) domain-containing protein. | 0.914 |
CQD06436.1 | CQD23951.1 | BN1232_01113 | BN1232_05963 | Ferredoxin reductase. | FAD-dependent pyridine nucleotide-disulfide oxidoreductase. | 0.823 |
CQD08626.1 | CQD04304.1 | BN1232_01553 | BN1232_00649 | FAD-dependent pyridine nucleotide-disulfide oxidoreductase. | Nitrite reductase [NAD(P)H], large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.820 |
CQD08626.1 | CQD06436.1 | BN1232_01553 | BN1232_01113 | FAD-dependent pyridine nucleotide-disulfide oxidoreductase. | Ferredoxin reductase. | 0.830 |
CQD08626.1 | CQD22719.1 | BN1232_01553 | BN1232_05715 | FAD-dependent pyridine nucleotide-disulfide oxidoreductase. | Rieske (2Fe-2S) domain-containing protein. | 0.919 |
CQD14038.1 | CQD14042.1 | BN1232_02891 | BN1232_02892 | Monooxygenase hydroxylase, subunit A. | Toluene-4-monooxygenase system protein B (TmoB). | 0.998 |
CQD14038.1 | CQD14051.1 | BN1232_02891 | BN1232_02895 | Monooxygenase hydroxylase, subunit A. | Methane/Phenol/Toluene Hydroxylase. | 0.999 |
CQD14038.1 | CQD22719.1 | BN1232_02891 | BN1232_05715 | Monooxygenase hydroxylase, subunit A. | Rieske (2Fe-2S) domain-containing protein. | 0.974 |
CQD14038.1 | CQD23978.1 | BN1232_02891 | BN1232_05989 | Monooxygenase hydroxylase, subunit A. | Monooxygenase hydroxylase, subunit B. | 0.997 |
CQD14042.1 | CQD14038.1 | BN1232_02892 | BN1232_02891 | Toluene-4-monooxygenase system protein B (TmoB). | Monooxygenase hydroxylase, subunit A. | 0.998 |
CQD14042.1 | CQD14051.1 | BN1232_02892 | BN1232_02895 | Toluene-4-monooxygenase system protein B (TmoB). | Methane/Phenol/Toluene Hydroxylase. | 0.998 |
CQD14042.1 | CQD22719.1 | BN1232_02892 | BN1232_05715 | Toluene-4-monooxygenase system protein B (TmoB). | Rieske (2Fe-2S) domain-containing protein. | 0.930 |
CQD14042.1 | CQD23977.1 | BN1232_02892 | BN1232_05988 | Toluene-4-monooxygenase system protein B (TmoB). | Monooxygenase hydroxylase, subunit A. | 0.993 |
CQD14042.1 | CQD23978.1 | BN1232_02892 | BN1232_05989 | Toluene-4-monooxygenase system protein B (TmoB). | Monooxygenase hydroxylase, subunit B. | 0.991 |
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