KSU59624.1 protein (Gordonia sp. SGDV85) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

KSU59624.1

Transcription elongation factor GreA; Derived by automated computational analysis using gene prediction method: Protein Homology. (163 aa)

Predicted Functional Partners:

KSU55087.1

0.986

KSU55088.1

0.976

KSU57935.1

0.968

KSU60008.1

0.965

KSU59777.1

0.815

KSU59776.1

0.768

KSU58428.1

0.710

KSU60879.1

0.701

KSU60768.1

0.662

KSU60962.1

0.635

Your Current Organism:

Gordonia sp. SGDV85

NCBI taxonomy Id: 1414651
Other names: G. sp. SGD-V-85, Gordonia sp. SGD-V-85

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KSU55087.1	KSU55088.1	AS181_20210	AS181_20215	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KSU55087.1	KSU57935.1	AS181_20210	AS181_12815	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KSU55087.1	KSU59624.1	AS181_20210	AS181_06365	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcription elongation factor GreA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.986
KSU55087.1	KSU60008.1	AS181_20210	AS181_04115	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit omega; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KSU55087.1	KSU60768.1	AS181_20210	AS181_03105	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S15; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.936
KSU55088.1	KSU55087.1	AS181_20215	AS181_20210	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KSU55088.1	KSU57935.1	AS181_20215	AS181_12815	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KSU55088.1	KSU59624.1	AS181_20215	AS181_06365	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcription elongation factor GreA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.976
KSU55088.1	KSU60008.1	AS181_20215	AS181_04115	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit omega; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KSU55088.1	KSU60768.1	AS181_20215	AS181_03105	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S15; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.959
KSU55088.1	KSU60879.1	AS181_20215	AS181_03940	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	GTP pyrophosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.413
KSU57935.1	KSU55087.1	AS181_12815	AS181_20210	DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KSU57935.1	KSU55088.1	AS181_12815	AS181_20215	DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KSU57935.1	KSU59624.1	AS181_12815	AS181_06365	DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcription elongation factor GreA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.968
KSU57935.1	KSU60008.1	AS181_12815	AS181_04115	DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit omega; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KSU57935.1	KSU60768.1	AS181_12815	AS181_03105	DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S15; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
KSU58428.1	KSU59624.1	AS181_10010	AS181_06365	16S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcription elongation factor GreA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.710
KSU59624.1	KSU55087.1	AS181_06365	AS181_20210	Transcription elongation factor GreA; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.986
KSU59624.1	KSU55088.1	AS181_06365	AS181_20215	Transcription elongation factor GreA; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.976
KSU59624.1	KSU57935.1	AS181_06365	AS181_12815	Transcription elongation factor GreA; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.968