STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHH15028.1Hypothetical protein. (225 aa)    
Predicted Functional Partners:
AHH15027.1
Putative ABC transporter, ATP-binding/membrane protein.
       0.740
AHH17149.1
Hypothetical protein.
  
     0.671
AHH15829.1
Hypothetical protein.
  
     0.667
AHH16212.1
Hypothetical protein.
  
     0.656
eccE
Putative type VII secretion system protein EccE.
  
     0.650
AHH20189.1
Putative glycosyltransferase.
  
     0.629
AHH20089.1
Hypothetical protein.
  
     0.620
AHH21998.1
Hypothetical protein.
 
     0.616
AHH20640.1
Hypothetical protein.
  
     0.604
AHH21490.1
Putative acyl-ACP thioesterase.
  
     0.603
Your Current Organism:
Nocardia nova
NCBI taxonomy Id: 1415166
Other names: N. nova SH22a, Nocardia nova SH22a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.