STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHH15883.1Putative Zn-dependent hydrolase. (313 aa)    
Predicted Functional Partners:
AHH15884.1
Putative polyketide synthase bifunctional cyclase/dehydratase.
  
 
 0.973
AHH15881.1
Dienelactone hydrolase family protein.
  
   0.794
AHH15880.1
acetyl-/propionyl-CoA carboxylase beta subunit.
  
    0.781
AHH15882.1
Putative fatty-acid--AMP ligase.
     
 0.765
AHH15885.1
Putative ketoacyl reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.747
AHH15887.1
Type II polyketide synthase, beta-ketoacyl synthase domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
     
 0.710
AHH15888.1
Type II polyketide synthase, beta-ketoacyl synthase domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
     
 0.710
AHH15879.1
acetyl-/propionyl-CoA carboxylase epsilon subunit.
       0.694
AHH15878.1
acetyl-/propionyl-CoA carboxylase alpha subunit.
       0.680
AHH15886.1
Type II polyketide synthase, acyl carrier protein.
       0.678
Your Current Organism:
Nocardia nova
NCBI taxonomy Id: 1415166
Other names: N. nova SH22a, Nocardia nova SH22a
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.