STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHH18263.1Putative serine/threonine protein kinase. (763 aa)    
Predicted Functional Partners:
AHH14863.1
Putative serine/threonine protein kinase.
 
 
 0.869
AHH15256.1
FHA domain-containing protein.
 
 
 
 0.732
AHH17973.1
FHA domain-containing protein.
 
 
 
 0.665
AHH18262.1
Putative membrane protein.
       0.636
AHH18941.1
Putative protein phosphatase.
 
 
 0.621
pknB
Serine/threonine protein kinase PknB.
 
 
0.543
pknL
Serine/threonine-protein kinase PpknL.
 
 
0.543
AHH14864.1
FHA domain-containing protein.
 
 
 
 0.540
AHH18150.1
Putative histidine kinase.
 
 
 0.524
pknG
Putative serine/threonine-protein kinase PknG.
  
     0.512
Your Current Organism:
Nocardia nova
NCBI taxonomy Id: 1415166
Other names: N. nova SH22a, Nocardia nova SH22a
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