STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOX04135.1Peptide ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (373 aa)    
Predicted Functional Partners:
KOX08446.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.970
KOX08323.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.929
KOX08020.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.927
KOX03194.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.925
KOX10946.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.917
KOX10680.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.913
KOX04134.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.913
KOX09562.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.911
KOX04065.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.907
KOX04025.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.901
Your Current Organism:
Micromonospora sp. NRRLB16802
NCBI taxonomy Id: 1415541
Other names: M. sp. NRRL B-16802, Micromonospora sp. NRRL B-16802
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