STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOX03192.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (929 aa)    
Predicted Functional Partners:
KOX09626.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.835
KOX14358.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.828
KOX04985.1
LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.810
KOX14689.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.798
KOX04971.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  0.796
KOX08321.1
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.773
KOX09304.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.758
KOX05785.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.746
KOX07702.1
TrmB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.739
KOX05823.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.738
Your Current Organism:
Micromonospora sp. NRRLB16802
NCBI taxonomy Id: 1415541
Other names: M. sp. NRRL B-16802, Micromonospora sp. NRRL B-16802
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.