STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOX02727.1Glycoside hydrolase family 18; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 18 family. (456 aa)    
Predicted Functional Partners:
KOX08716.1
Cellulose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 18 family.
 
 0.910
KOX11738.1
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 18 family.
 
0.898
KOX07995.1
Glucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.884
KOX06739.1
Cytochrome C oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.845
KOX06744.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.844
KOX08768.1
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.806
KOX03219.1
Glycoside hydrolase family 18; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 18 family.
 
 0.804
KOX06770.1
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 18 family.
 
  
 
0.786
KOX14340.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.723
KOX10587.1
Sugar hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.721
Your Current Organism:
Micromonospora sp. NRRLB16802
NCBI taxonomy Id: 1415541
Other names: M. sp. NRRL B-16802, Micromonospora sp. NRRL B-16802
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.