STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOU69159.1RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. (396 aa)    
Predicted Functional Partners:
KOU69158.1
DGPFAETKE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.951
KOU57953.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.794
KOU67578.1
DGPF domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.787
KOU69157.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.575
KOU70975.1
DGPF domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.549
KOU61610.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.497
KOU55099.1
ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.441
KOU55115.1
Activator of HSP90 ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.421
Your Current Organism:
Streptomyces sp. MMG1533
NCBI taxonomy Id: 1415546
Other names: S. sp. MMG1533
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.