STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000744955_01937Unannotated protein. (416 aa)    
Predicted Functional Partners:
GCA_000744955_00146
Unannotated protein.
 
 
 0.902
GCA_000744955_03521
Unannotated protein.
  
 
 0.874
GCA_000744955_01938
Unannotated protein.
  
    0.778
GCA_000744955_01549
Unannotated protein.
  
 
 0.762
GCA_000744955_00245
Unannotated protein.
  
  
 0.724
GCA_000744955_01936
Unannotated protein.
    
  0.710
GCA_000744955_01935
Unannotated protein.
    
 0.685
GCA_000744955_03523
Unannotated protein.
  
  
 0.644
GCA_000744955_00867
Unannotated protein.
  
 
 0.619
GCA_000744955_00558
Unannotated protein.
  
 
 0.614
Your Current Organism:
Oceanicola sp. MCTG156
NCBI taxonomy Id: 1415756
Other names: O. sp. MCTG156(1a), Oceanicola sp. MCTG156(1a)
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.