STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000744955_02438Unannotated protein. (456 aa)    
Predicted Functional Partners:
GCA_000744955_02439
Unannotated protein.
 0.993
GCA_000744955_02437
Unannotated protein.
 
 0.867
GCA_000744955_02440
Unannotated protein.
     
 0.791
GCA_000744955_02911
Unannotated protein.
   
 0.735
GCA_000744955_00349
Unannotated protein.
 
  
 0.732
GCA_000744955_00471
Unannotated protein.
 
  
 0.721
GCA_000744955_01547
Unannotated protein.
 
  
 0.687
GCA_000744955_03321
Unannotated protein.
 
 
 0.676
GCA_000744955_01469
Unannotated protein.
 
 0.615
GCA_000744955_02436
Unannotated protein.
 
    
0.606
Your Current Organism:
Oceanicola sp. MCTG156
NCBI taxonomy Id: 1415756
Other names: O. sp. MCTG156(1a), Oceanicola sp. MCTG156(1a)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.