STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OVS_03695Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (466 aa)    
Predicted Functional Partners:
OVS_03680
Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.925
OVS_00560
Spermidine/putrescine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.818
OVS_00655
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.818
OVS_00840
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.818
OVS_03700
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.663
OVS_03705
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.595
OVS_03710
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.571
gpmI
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.521
OVS_03725
Triosephosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.502
OVS_03715
Purine-nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.495
Your Current Organism:
Mycoplasma ovis
NCBI taxonomy Id: 1415773
Other names: M. ovis str. Michigan, Mycoplasma ovis str. Michigan
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