STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000744735_00148Unannotated protein. (276 aa)    
Predicted Functional Partners:
GCA_000744735_00118
Unannotated protein.
  
 
 0.980
GCA_000744735_00149
Unannotated protein.
 
    0.976
GCA_000744735_01588
Unannotated protein.
    
 0.961
GCA_000744735_00147
Unannotated protein.
 
 0.954
GCA_000744735_00892
Unannotated protein.
 
  
 0.936
GCA_000744735_00744
Unannotated protein.
 
 
 
 0.930
GCA_000744735_01021
Unannotated protein.
   
  0.901
GCA_000744735_00150
Unannotated protein.
  
  
 0.872
GCA_000744735_01684
Unannotated protein.
  
  
 0.821
GCA_000744735_00308
Unannotated protein.
  
 0.747
Your Current Organism:
Porticoccus hydrocarbonoclasticus
NCBI taxonomy Id: 1415778
Other names: P. hydrocarbonoclasticus MCTG13d, Porticoccus hydrocarbonoclasticus MCTG13d
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.