STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000711245_00005Unannotated protein. (241 aa)    
Predicted Functional Partners:
GCA_000711245_01185
Unannotated protein.
 
 
 0.943
GCA_000711245_02730
Unannotated protein.
 
  
 0.905
GCA_000711245_01198
Unannotated protein.
 
  
 0.815
GCA_000711245_00620
Unannotated protein.
 
    0.806
GCA_000711245_03194
Unannotated protein.
  
  
 0.701
GCA_000711245_01639
Unannotated protein.
   
   0.693
GCA_000711245_02535
Unannotated protein.
  
  
 0.689
GCA_000711245_02160
Unannotated protein.
   
  
 0.686
GCA_000711245_00004
Unannotated protein.
     
 0.622
GCA_000711245_03265
Unannotated protein.
  
  
 0.610
Your Current Organism:
Polycyclovorans algicola
NCBI taxonomy Id: 1415779
Other names: P. algicola TG408, Polycyclovorans algicola TG408
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.