STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000711245_00491Unannotated protein. (737 aa)    
Predicted Functional Partners:
GCA_000711245_02922
Unannotated protein.
   
 
  0.744
GCA_000711245_02921
Unannotated protein.
    
  0.557
GCA_000711245_00492
Unannotated protein.
       0.556
GCA_000711245_01236
Unannotated protein.
   
    0.520
GCA_000711245_00577
Unannotated protein.
  
  
 0.516
GCA_000711245_01237
Unannotated protein.
   
    0.471
GCA_000711245_00493
Unannotated protein.
       0.469
GCA_000711245_00977
Unannotated protein.
  
     0.450
GCA_000711245_00316
Unannotated protein.
  
     0.443
GCA_000711245_00418
Unannotated protein.
   
 
 0.431
Your Current Organism:
Polycyclovorans algicola
NCBI taxonomy Id: 1415779
Other names: P. algicola TG408, Polycyclovorans algicola TG408
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.