STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000711245_02487Unannotated protein. (424 aa)    
Predicted Functional Partners:
GCA_000711245_00570
Unannotated protein.
   
 
 0.932
GCA_000711245_00571
Unannotated protein.
   
   0.917
GCA_000711245_01392
Unannotated protein.
   
   0.901
GCA_000711245_00338
Unannotated protein.
   
   0.872
GCA_000711245_00016
Unannotated protein.
   
 0.644
GCA_000711245_02828
Unannotated protein.
   
 0.644
GCA_000711245_02486
Unannotated protein.
    
  0.626
GCA_000711245_02298
Unannotated protein.
  
  
  0.577
GCA_000711245_01867
Unannotated protein.
   
    0.553
GCA_000711245_00020
Unannotated protein.
    
  0.545
Your Current Organism:
Polycyclovorans algicola
NCBI taxonomy Id: 1415779
Other names: P. algicola TG408, Polycyclovorans algicola TG408
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.