STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000733765_00457Unannotated protein. (104 aa)    
Predicted Functional Partners:
GCA_000733765_00381
Unannotated protein.
   
 0.777
GCA_000733765_02157
Unannotated protein.
   
 0.777
GCA_000733765_00865
Unannotated protein.
  
  
 0.624
GCA_000733765_00770
Unannotated protein.
 
  
 0.600
GCA_000733765_00771
Unannotated protein.
     
 0.568
GCA_000733765_00756
Unannotated protein.
     
 0.546
GCA_000733765_00757
Unannotated protein.
     
 0.546
GCA_000733765_03246
Unannotated protein.
     
 0.544
GCA_000733765_00866
Unannotated protein.
     
 0.519
GCA_000733765_00658
Unannotated protein.
     
 0.491
Your Current Organism:
Algiphilus aromaticivorans
NCBI taxonomy Id: 1415780
Other names: A. aromaticivorans DG1253, Algiphilus aromaticivorans DG1253, gamma proteobacterium DG1253
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.