STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000733765_03251Unannotated protein. (215 aa)    
Predicted Functional Partners:
GCA_000733765_01990
Unannotated protein.
   
  0.829
GCA_000733765_01546
Unannotated protein.
   
  0.803
GCA_000733765_01558
Unannotated protein.
   
  0.803
GCA_000733765_02093
Unannotated protein.
    
 0.799
GCA_000733765_01096
Unannotated protein.
   
  0.798
GCA_000733765_03414
Unannotated protein.
   
  0.794
GCA_000733765_02359
Unannotated protein.
   
 0.793
GCA_000733765_01681
Unannotated protein.
   
  0.790
GCA_000733765_02676
Unannotated protein.
    
  0.744
GCA_000733765_00605
Unannotated protein.
  
  
  0.740
Your Current Organism:
Algiphilus aromaticivorans
NCBI taxonomy Id: 1415780
Other names: A. aromaticivorans DG1253, Algiphilus aromaticivorans DG1253, gamma proteobacterium DG1253
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.