STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpoBHypothetical protein contains tetratricopeptide-like helical domain; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. (296 aa)    
Predicted Functional Partners:
tolB1
TolB protein precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
  
 0.898
tilS
tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.
 
    0.829
tolB2
Putative TolB-like protein.
  
  
 0.751
pal
Putative outer membrane lipoprotein Omp16-like protein precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
  
 0.738
AHK46338.1
OmpA family protein.
 
 
 0.670
OV14_1462
Hypothetical protein contains peptidoglycan binding domain.
 
 
 
 0.628
tolR
Putative biopolymer transport protein, TolR.
 
  
 0.626
tolQ
Putative TolQ protein uptake system component; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
  
 0.616
ppiD
Peptidyl-prolyl cis-trans isomerase D.
 
  
 0.595
exbD
Biopolymer transport ExbD protein.
 
  
 0.571
Your Current Organism:
Ensifer adhaerens
NCBI taxonomy Id: 1416753
Other names: E. adhaerens OV14, Ensifer adhaerens OV14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.