STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHK45418.1Hypothetical protein. (353 aa)    
Predicted Functional Partners:
aapM-2
Putative amino acid ABC transporter, permease protein.
 
 0.991
aapQ-2
Putative amino-acid ABC transporter membrane protein.
 
 
 0.990
aapM-3
Putative amino acid ABC transporter, permease protein.
 
 0.963
aapM
Putative amino acid ABC transporter, permease protein.
 
 0.962
aapQ
Putative amino-acid ABC transporter membrane protein.
 
 
 0.957
aapQ-3
Putative amino-acid ABC transporter membrane protein.
 
 
 0.957
aapP
Putative ATP-binding component of a transport system.
 
 0.956
aapP-2
Putative ATP-binding component of a transport system.
 
 0.937
AHK45398.1
Putative ABC-type polar amino acid transport system, ATPase component.
  
 
 0.471
AHK45415.1
Putative dehydrogenase protein.
  
    0.430
Your Current Organism:
Ensifer adhaerens
NCBI taxonomy Id: 1416753
Other names: E. adhaerens OV14, Ensifer adhaerens OV14
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