Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AHK46020.1 | AHK46021.1 | OV14_a1025 | OV14_a1026 | Putative integrase-like protein. | Hypothetical protein. | 0.605 |
AHK46020.1 | OV14_0022 | OV14_a1025 | OV14_0022 | Putative integrase-like protein. | Putative competence protein F. | 0.457 |
AHK46020.1 | OV14_1480 | OV14_a1025 | OV14_1480 | Putative integrase-like protein. | Putative two-component sensor histidine kinase. | 0.424 |
AHK46021.1 | AHK46020.1 | OV14_a1026 | OV14_a1025 | Hypothetical protein. | Putative integrase-like protein. | 0.605 |
OV14_0022 | AHK46020.1 | OV14_0022 | OV14_a1025 | Putative competence protein F. | Putative integrase-like protein. | 0.457 |
OV14_0022 | OV14_1480 | OV14_0022 | OV14_1480 | Putative competence protein F. | Putative two-component sensor histidine kinase. | 0.705 |
OV14_1480 | AHK46020.1 | OV14_1480 | OV14_a1025 | Putative two-component sensor histidine kinase. | Putative integrase-like protein. | 0.424 |
OV14_1480 | OV14_0022 | OV14_1480 | OV14_0022 | Putative two-component sensor histidine kinase. | Putative competence protein F. | 0.705 |