STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF75388.1Short-chain dehydrogenase. (269 aa)    
Predicted Functional Partners:
SHF75428.1
Hypothetical protein.
 
     0.704
SHF75328.1
Uncharacterized conserved protein GlcG, DUF336 family.
 
     0.675
SHG36070.1
Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.565
SHF72276.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
 
  0.534
SHG59557.1
Polyketide-type polyunsaturated fatty acid synthase PfaA.
   
 0.530
SHG75797.1
3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.487
SHG80428.1
3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
 
0.470
SHE65350.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
 
  0.461
SHF22464.1
Short-chain dehydrogenase.
  
     0.457
SHG09224.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.457
Your Current Organism:
Chryseobacterium arachidis
NCBI taxonomy Id: 1416778
Other names: C. arachidis, CCM 8489, Chryseobacterium sp. 91A-593, DSM 27619, LMG 27813, LMG:27813, strain 91A-593
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.