STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG32945.1Protein of unknown function. (155 aa)    
Predicted Functional Partners:
SHG32991.1
Mannose-6-phosphate isomerase, cupin superfamily.
       0.773
SHG33023.1
3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
       0.762
SHG32908.1
SH3 domain-containing protein.
       0.722
SHG32871.1
Predicted O-methyltransferase YrrM.
       0.525
Your Current Organism:
Chryseobacterium arachidis
NCBI taxonomy Id: 1416778
Other names: C. arachidis, CCM 8489, Chryseobacterium sp. 91A-593, DSM 27619, LMG 27813, LMG:27813, strain 91A-593
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.