STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG42354.1Lipocalin-like domain-containing protein. (164 aa)    
Predicted Functional Partners:
SHG42391.1
Outer membrane protein OmpA.
 
     0.820
SHG01272.1
Protein of unknown function.
  
     0.745
SHG38907.1
Hypothetical protein.
  
     0.718
SHE32892.1
Family of unknown function.
  
     0.717
SHG31186.1
Hypothetical protein.
  
     0.693
SHF11719.1
Hypothetical protein.
  
     0.689
SHE83387.1
Protein of unknown function.
  
     0.688
SHF65863.1
Protein of unknown function.
  
     0.685
SHE91378.1
Putative porin.
  
     0.682
SHF38064.1
Hypothetical protein.
  
     0.672
Your Current Organism:
Chryseobacterium arachidis
NCBI taxonomy Id: 1416778
Other names: C. arachidis, CCM 8489, Chryseobacterium sp. 91A-593, DSM 27619, LMG 27813, LMG:27813, strain 91A-593
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.