STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN81221.1Protein of unknown function. (261 aa)    
Predicted Functional Partners:
SIN81232.1
Hypothetical protein.
       0.773
SIN81507.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.673
SIO03639.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.589
SIN90465.1
ATPase family associated with various cellular activities (AAA).
  
     0.574
SIO15661.1
YceI-like domain-containing protein.
  
     0.574
SIO31558.1
Hypothetical protein.
  
     0.479
SIN81883.1
GLPGLI family protein.
  
     0.472
SIN98189.1
Helix-turn-helix domain-containing protein.
  
     0.464
SIO44574.1
L,D-transpeptidase catalytic domain.
  
     0.463
SIN81245.1
Lipid kinase, YegS/Rv2252/BmrU family.
       0.449
Your Current Organism:
Chryseobacterium zeae
NCBI taxonomy Id: 1416779
Other names: C. zeae, CCM 8491, DSM 27623, LMG 27809, LMG:27809
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.