ARP83074.1 protein (Bordetella genomosp. 8) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

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Experiments

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[Homology]

Score

ARP83074.1

ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa)

Predicted Functional Partners:

ARP83075.1

0.994

ARP83076.1

0.994

ARP83077.1

0.989

ARP81899.1

0.829

ARP84543.1

0.827

ARP80698.1

0.801

ARP84228.1

0.778

ARP83835.1

0.777

ARP83915.1

0.776

ARP83836.1

0.767

Your Current Organism:

Bordetella genomosp. 8

NCBI taxonomy Id: 1416806
Other names: B. genomosp. 8, Bordetella genogroup 8, Bordetella sp. AU19157

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARP80698.1	ARP81899.1	CAL12_07495	CAL12_14465	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arginine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.560
ARP80698.1	ARP83074.1	CAL12_07495	CAL12_21140	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.801
ARP80698.1	ARP83075.1	CAL12_07495	CAL12_21145	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.619
ARP80698.1	ARP83076.1	CAL12_07495	CAL12_21150	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.636
ARP80698.1	ARP83077.1	CAL12_07495	CAL12_21155	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	0.823
ARP80698.1	ARP83835.1	CAL12_07495	CAL12_25500	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.643
ARP80698.1	ARP83836.1	CAL12_07495	CAL12_25505	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.623
ARP80698.1	ARP83915.1	CAL12_07495	CAL12_25945	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.638
ARP80698.1	ARP84228.1	CAL12_07495	CAL12_27695	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.461
ARP80698.1	ARP84543.1	CAL12_07495	CAL12_14470	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.546
ARP81899.1	ARP80698.1	CAL12_14465	CAL12_07495	Arginine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.560
ARP81899.1	ARP83074.1	CAL12_14465	CAL12_21140	Arginine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.829
ARP81899.1	ARP83075.1	CAL12_14465	CAL12_21145	Arginine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.529
ARP81899.1	ARP83076.1	CAL12_14465	CAL12_21150	Arginine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.532
ARP81899.1	ARP83077.1	CAL12_14465	CAL12_21155	Arginine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.	0.749
ARP81899.1	ARP83835.1	CAL12_14465	CAL12_25500	Arginine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.535
ARP81899.1	ARP83836.1	CAL12_14465	CAL12_25505	Arginine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.536
ARP81899.1	ARP83915.1	CAL12_14465	CAL12_25945	Arginine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.545
ARP81899.1	ARP84228.1	CAL12_14465	CAL12_27695	Arginine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.562
ARP81899.1	ARP84543.1	CAL12_14465	CAL12_14470	Arginine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.982

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