STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HTG_09320Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (499 aa)    
Predicted Functional Partners:
HTG_13385
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Prodigal-2.6.2.
 
 0.948
HTG_11770
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.902
HTG_08680
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Prodigal-2.6.2.
    
 0.874
HTG_17400
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Prodigal-2.6.2.
  
 
 0.855
HTG_05070
HoxA transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.847
cheB
Chemotaxis protein CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
 0.843
HTG_04900
Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.806
HTG_15465
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.802
HTG_04865
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.793
HTG_04880
Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.775
Your Current Organism:
Haloterrigena mahii
NCBI taxonomy Id: 1416969
Other names: BCRC 910151, H. mahii, Haloterrigena mahii Ding et al. 2017, Haloterrigena sp. H13, NBRC 111885, strain H13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.