STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HTG_10265Hypothetical protein; Derived by automated computational analysis using gene prediction method: Prodigal-2.6.2. (149 aa)    
Predicted Functional Partners:
HTG_04775
UspA domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.530
HTG_10270
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Prodigal-2.6.2.
       0.459
Your Current Organism:
Haloterrigena mahii
NCBI taxonomy Id: 1416969
Other names: BCRC 910151, H. mahii, Haloterrigena mahii Ding et al. 2017, Haloterrigena sp. H13, NBRC 111885, strain H13
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.