STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EXE53_04740Unannotated protein. (358 aa)    
Predicted Functional Partners:
EXE53_02140
Unannotated protein.
  
 0.872
EXE53_08125
Unannotated protein; Belongs to the aldehyde dehydrogenase family.
 
 
 0.871
EXE53_14030
Unannotated protein.
   
 
  0.592
gdh
Unannotated protein; Catalyzes the NAD(P)(+)-dependent oxidation of D-glucose to D-gluconate via gluconolactone. Can utilize both NAD(+) and NADP(+) as electron acceptor. Is involved in the degradation of glucose through a modified Entner-Doudoroff pathway.
 
 0.581
EXE53_08420
Unannotated protein.
 
0.571
dapF
Unannotated protein; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine.
 
  
  0.553
EXE53_10260
Unannotated protein.
 
 0.543
EXE53_15180
Unannotated protein.
  
  
 
0.520
EXE53_00610
Unannotated protein.
 
 
 0.506
EXE53_03415
Unannotated protein; Belongs to the aldehyde dehydrogenase family.
 
 
 0.506
Your Current Organism:
Halorubrum sp. SD626R
NCBI taxonomy Id: 1419722
Other names: H. sp. SD626R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.