STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EXE53_14870Unannotated protein. (318 aa)    
Predicted Functional Partners:
EXE53_14865
Unannotated protein.
 
     0.629
EXE53_06875
Unannotated protein.
   
    0.483
EXE53_14185
Unannotated protein.
 
   
 0.447
tfb-4
Unannotated protein; Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB).
       0.420
EXE53_14860
Unannotated protein.
       0.406
Your Current Organism:
Halorubrum sp. SD626R
NCBI taxonomy Id: 1419722
Other names: H. sp. SD626R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.