Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KMS52289.1 | KMS54150.1 | V473_20780 | V473_18315 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ATPase B chain family. | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.723 |
| KMS52289.1 | atpE | V473_20780 | V473_06600 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ATPase B chain family. | F0F1 ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.998 |
| KMS52289.1 | atpE-2 | V473_20780 | V473_20775 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ATPase B chain family. | F0F1 ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
| KMS52289.1 | atpH | V473_20780 | V473_03805 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ATPase B chain family. | ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.540 |
| KMS52289.1 | frr | V473_20780 | V473_12470 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ATPase B chain family. | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | 0.707 |
| KMS54150.1 | KMS52289.1 | V473_18315 | V473_20780 | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ATPase B chain family. | 0.723 |
| KMS54150.1 | KMS55828.1 | V473_18315 | V473_14010 | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.751 |
| KMS54150.1 | KMS57654.1 | V473_18315 | V473_05425 | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Translation factor Sua5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | 0.780 |
| KMS54150.1 | atpE | V473_18315 | V473_06600 | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | F0F1 ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.748 |
| KMS54150.1 | atpE-2 | V473_18315 | V473_20775 | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | F0F1 ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.748 |
| KMS54150.1 | atpH | V473_18315 | V473_03805 | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.723 |
| KMS54150.1 | frr | V473_18315 | V473_12470 | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | 0.724 |
| KMS54150.1 | hisS | V473_18315 | V473_18305 | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | histidyl-tRNA synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.802 |
| KMS54150.1 | plsX | V473_18315 | V473_17045 | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. | 0.750 |
| KMS54150.1 | prfA | V473_18315 | V473_18310 | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.999 |
| KMS55828.1 | KMS54150.1 | V473_14010 | V473_18315 | Coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.751 |
| KMS57654.1 | KMS54150.1 | V473_05425 | V473_18315 | Translation factor Sua5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.780 |
| atpE | KMS52289.1 | V473_06600 | V473_20780 | F0F1 ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ATPase B chain family. | 0.998 |
| atpE | KMS54150.1 | V473_06600 | V473_18315 | F0F1 ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.748 |
| atpE | atpE-2 | V473_06600 | V473_20775 | F0F1 ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | F0F1 ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.859 |
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