STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMS52270.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (33 aa)    
Predicted Functional Partners:
KMS52271.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.701
KMS52272.1
Metal-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.701
KMS52269.1
Copper resistance protein CopB; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.625
KMS52268.1
Copper-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.534
KMS52267.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.527
Your Current Organism:
Sphingobium czechense
NCBI taxonomy Id: 1420583
Other names: S. czechense LL01, Sphingobium czechense LL01, Sphingobium sp. LL01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.