Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OQK17884.1 | OQK17886.1 | AU255_08490 | AU255_08500 | EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology. | EF-P lysine aminoacylase GenX; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.895 |
| OQK17884.1 | efp | AU255_08490 | AU255_08495 | EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | 0.881 |
| OQK17886.1 | OQK17884.1 | AU255_08500 | AU255_08490 | EF-P lysine aminoacylase GenX; Derived by automated computational analysis using gene prediction method: Protein Homology. | EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.895 |
| OQK17886.1 | OQK18459.1 | AU255_08500 | AU255_11765 | EF-P lysine aminoacylase GenX; Derived by automated computational analysis using gene prediction method: Protein Homology. | Elongation factor P-like protein YeiP; Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro, suggesting its involvement in the formation of the first peptide bond of a protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the elongation factor P family. | 0.893 |
| OQK17886.1 | bamA | AU255_08500 | AU255_08505 | EF-P lysine aminoacylase GenX; Derived by automated computational analysis using gene prediction method: Protein Homology. | Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.613 |
| OQK17886.1 | efp | AU255_08500 | AU255_08495 | EF-P lysine aminoacylase GenX; Derived by automated computational analysis using gene prediction method: Protein Homology. | Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | 0.980 |
| OQK18459.1 | OQK17886.1 | AU255_11765 | AU255_08500 | Elongation factor P-like protein YeiP; Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro, suggesting its involvement in the formation of the first peptide bond of a protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the elongation factor P family. | EF-P lysine aminoacylase GenX; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.893 |
| bamA | OQK17886.1 | AU255_08505 | AU255_08500 | Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | EF-P lysine aminoacylase GenX; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.613 |
| bamA | efp | AU255_08505 | AU255_08495 | Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | 0.509 |
| efp | OQK17884.1 | AU255_08495 | AU255_08490 | Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.881 |
| efp | OQK17886.1 | AU255_08495 | AU255_08500 | Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | EF-P lysine aminoacylase GenX; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.980 |
| efp | bamA | AU255_08495 | AU255_08505 | Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.509 |