STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQK18158.1Membrane fusion protein of tripartite multidrug resistance system; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)    
Predicted Functional Partners:
OQK18739.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.991
OQK18159.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.
 
 0.984
OQK15824.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.894
OQK15803.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.748
OQK18548.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.665
OQK18752.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.644
OQK18291.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.597
OQK15233.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.597
OQK18222.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.537
OQK16732.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
  0.479
Your Current Organism:
Methyloprofundus sedimenti
NCBI taxonomy Id: 1420851
Other names: ATCC BAA-2619, LMG 28393, LMG:28393, M. sedimenti, Methylococcaceae bacterium WF1, Methyloprofundus sedimenti Tavormina et al. 2015, strain WF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.