STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V492_02538Uncharacterized protein. (631 aa)    
Predicted Functional Partners:
V492_03181
MI domain-containing protein.
   
  0.992
V492_08336
WD_REPEATS_REGION domain-containing protein.
   
  0.991
V492_03063
Uncharacterized protein.
    
  0.980
V492_03713
C2H2-type domain-containing protein.
   
 
  0.975
V492_00341
Uncharacterized protein.
    
 0.936
V492_00053
Uncharacterized protein.
   
 0.934
V492_03740
Smg4_UPF3 domain-containing protein.
   
 
 0.886
V492_04309
MPN domain-containing protein.
    
 
 0.882
V492_06312
RRM domain-containing protein.
 
 
 0.876
V492_04715
Uncharacterized protein.
   
  0.870
Your Current Organism:
Pseudogymnoascus sp. VKMF4246
NCBI taxonomy Id: 1420902
Other names: P. sp. VKM F-4246, Pseudogymnoascus sp. VKM F-4246
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.