STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V492_07318DUF2263 domain-containing protein. (293 aa)    
Predicted Functional Partners:
V492_03706
PHB domain-containing protein.
   
 0.808
V492_04610
Prohibitin.
   
 0.808
V492_02221
PHB domain-containing protein.
   
 0.808
V492_03352
Prohibitin.
   
 0.808
V492_00716
Uncharacterized protein.
  
 
 0.703
V492_04114
Ribosomal_L2_C domain-containing protein.
   
 
 0.702
V492_07521
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.693
V492_04044
Uncharacterized protein.
   
 
 0.683
V492_07360
Uncharacterized protein.
  
   0.678
V492_07746
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.677
Your Current Organism:
Pseudogymnoascus sp. VKMF4246
NCBI taxonomy Id: 1420902
Other names: P. sp. VKM F-4246, Pseudogymnoascus sp. VKM F-4246
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.