Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
V493_01853 | V493_02538 | A0A094AMB4 | A0A094AP36 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Brix domain-containing protein. | 0.976 |
V493_01853 | V493_03104 | A0A094AMB4 | A0A094AL96 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Uncharacterized protein. | 0.990 |
V493_01853 | V493_03211 | A0A094AMB4 | A0A094AE79 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | RRM domain-containing protein. | 0.995 |
V493_01853 | V493_04980 | A0A094AMB4 | A0A094A5I9 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | F-box domain-containing protein. | 0.976 |
V493_01853 | V493_05033 | A0A094AMB4 | A0A094A545 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.990 |
V493_01853 | V493_05034 | A0A094AMB4 | A0A094CQE6 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. | 0.991 |
V493_01853 | V493_06018 | A0A094AMB4 | A0A094A0L4 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Uncharacterized protein. | 0.990 |
V493_01853 | V493_08238 | A0A094AMB4 | A0A094C8L6 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Uncharacterized protein. | 0.991 |
V493_01853 | V493_08666 | A0A094AMB4 | A0A093ZM33 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Uncharacterized protein. | 0.987 |
V493_01853 | YTM1 | A0A094AMB4 | A0A094CK79 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.991 |
V493_02538 | V493_01853 | A0A094AP36 | A0A094AMB4 | Brix domain-containing protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.976 |
V493_02538 | V493_03104 | A0A094AP36 | A0A094AL96 | Brix domain-containing protein. | Uncharacterized protein. | 0.991 |
V493_02538 | V493_03211 | A0A094AP36 | A0A094AE79 | Brix domain-containing protein. | RRM domain-containing protein. | 0.995 |
V493_02538 | V493_04980 | A0A094AP36 | A0A094A5I9 | Brix domain-containing protein. | F-box domain-containing protein. | 0.978 |
V493_02538 | V493_05033 | A0A094AP36 | A0A094A545 | Brix domain-containing protein. | 60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.988 |
V493_02538 | V493_05034 | A0A094AP36 | A0A094CQE6 | Brix domain-containing protein. | Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. | 0.949 |
V493_02538 | V493_06018 | A0A094AP36 | A0A094A0L4 | Brix domain-containing protein. | Uncharacterized protein. | 0.988 |
V493_02538 | V493_08238 | A0A094AP36 | A0A094C8L6 | Brix domain-containing protein. | Uncharacterized protein. | 0.987 |
V493_02538 | V493_08666 | A0A094AP36 | A0A093ZM33 | Brix domain-containing protein. | Uncharacterized protein. | 0.989 |
V493_02538 | YTM1 | A0A094AP36 | A0A094CK79 | Brix domain-containing protein. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.982 |
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