STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V493_04052C-CAP/cofactor C-like domain-containing protein. (378 aa)    
Predicted Functional Partners:
V493_07700
DUF1713 domain-containing protein.
    
 0.846
V493_04261
Uncharacterized protein.
    
 0.846
V493_07180
Uncharacterized protein.
    
 0.783
V493_08715
Uncharacterized protein.
    
 0.684
V493_08275
TFCD_C domain-containing protein.
    
 0.684
V493_08714
Uncharacterized protein.
    
 0.542
V493_08358
Uncharacterized protein.
    
 0.542
V493_03494
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.542
V493_08223
Uncharacterized protein.
    
 0.540
V493_06795
Uncharacterized protein.
    
 0.540
Your Current Organism:
Pseudogymnoascus sp. VKMF4281
NCBI taxonomy Id: 1420906
Other names: P. sp. VKM F-4281 (FW-2241), Pseudogymnoascus sp. VKM F-4281 (FW-2241)
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