STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V494_05085HTH APSES-type domain-containing protein. (424 aa)    
Predicted Functional Partners:
V494_05305
SUN domain-containing protein.
    
 
 0.859
V494_00289
Uncharacterized protein.
     
 0.821
V494_06490
Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.
    
 0.812
V494_00996
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.798
V494_02348
Uncharacterized protein.
     
 0.765
V494_05406
Uncharacterized protein.
   
 
 0.762
V494_02858
Uncharacterized protein.
     
 0.758
V494_00603
Uncharacterized protein.
   
 
 0.721
V494_03816
Uncharacterized protein.
   
 
 0.721
V494_05391
Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.
   
 
  0.643
Your Current Organism:
Pseudogymnoascus sp. VKMF4513
NCBI taxonomy Id: 1420907
Other names: P. sp. VKM F-4513 (FW-928), Pseudogymnoascus sp. VKM F-4513 (FW-928)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.