STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V496_08858Aspartate aminotransferase. (408 aa)    
Predicted Functional Partners:
V496_06066
Aspartate aminotransferase.
  
0.941
V496_08837
Malate dehydrogenase.
   
 0.920
V496_03052
Uncharacterized protein.
    
 
 0.910
V496_09260
NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.870
V496_03115
Uncharacterized protein.
   
 0.867
V496_02058
Aminotran_1_2 domain-containing protein.
   
 0.867
V496_03574
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.864
V496_10374
4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.863
V496_09016
Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.849
V496_07397
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
 0.841
Your Current Organism:
Pseudogymnoascus sp. VKMF4515
NCBI taxonomy Id: 1420909
Other names: P. sp. VKM F-4515 (FW-2607), Pseudogymnoascus sp. VKM F-4515 (FW-2607)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.