STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V496_07615Uncharacterized protein. (1041 aa)    
Predicted Functional Partners:
V496_08209
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.899
V496_05507
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.899
V496_01311
Uncharacterized protein; Belongs to the cullin family.
    
 0.899
V496_08312
Uncharacterized protein; Belongs to the SKP1 family.
   
 0.887
V496_09975
Uncharacterized protein.
   
 0.887
V496_02008
Uncharacterized protein; Belongs to the SKP1 family.
   
 0.887
V496_00423
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
   
 0.887
V496_06421
Uncharacterized protein.
    
 0.803
V496_07614
Uncharacterized protein; Belongs to the BI1 family.
 
      0.794
V496_03504
Ubiquitin-like domain-containing protein.
    
 0.794
Your Current Organism:
Pseudogymnoascus sp. VKMF4515
NCBI taxonomy Id: 1420909
Other names: P. sp. VKM F-4515 (FW-2607), Pseudogymnoascus sp. VKM F-4515 (FW-2607)
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