STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V496_05490Uncharacterized protein. (595 aa)    
Predicted Functional Partners:
V496_05314
SET domain-containing protein.
    
 
 0.945
V496_10409
Uncharacterized protein.
   
 0.941
V496_09478
SANT domain-containing protein.
   
 0.941
V496_07573
Uncharacterized protein.
   
 0.941
V496_00188
Hist_deacetyl domain-containing protein.
   
 0.937
V496_03157
Hist_deacetyl domain-containing protein.
   
 0.937
V496_09505
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.937
V496_07629
Uncharacterized protein.
    
 0.915
V496_09000
mRNA_triPase domain-containing protein.
   
 0.896
V496_01816
RRM domain-containing protein.
   
 0.896
Your Current Organism:
Pseudogymnoascus sp. VKMF4515
NCBI taxonomy Id: 1420909
Other names: P. sp. VKM F-4515 (FW-2607), Pseudogymnoascus sp. VKM F-4515 (FW-2607)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.