STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V496_04529Alpha_adaptinC2 domain-containing protein. (992 aa)    
Predicted Functional Partners:
V496_02367
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.994
V496_09833
STAS domain-containing protein.
   
0.952
V496_10010
AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
   
 0.922
V496_08568
Ubiquitin-like domain-containing protein.
   
 0.922
V496_04273
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.914
V496_04800
DUF1681 domain-containing protein.
    
  0.913
V496_07351
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.888
V496_10188
Uncharacterized protein.
   
 0.866
V496_06184
Uncharacterized protein.
  
 0.860
V496_00699
ENTH domain-containing protein.
    
 0.856
Your Current Organism:
Pseudogymnoascus sp. VKMF4515
NCBI taxonomy Id: 1420909
Other names: P. sp. VKM F-4515 (FW-2607), Pseudogymnoascus sp. VKM F-4515 (FW-2607)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.