STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V497_05891Arrestin_C domain-containing protein. (636 aa)    
Predicted Functional Partners:
V497_05188
Thioredoxin; Belongs to the thioredoxin family.
    
 0.713
V497_05016
Thioredoxin domain-containing protein.
    
 0.713
V497_00696
E3 ubiquitin-protein ligase.
    
 
 0.686
V497_08012
Uncharacterized protein.
    
 
 0.637
V497_00729
Thioredoxin domain-containing protein.
    
 0.584
V497_07194
Uncharacterized protein.
    
 0.565
V497_05780
Autophagy-related protein; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family.
    
 0.565
V497_07002
Queuine tRNA-ribosyltransferase accessory subunit 2; Non-catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine); Belongs to the queuine tRNA-ribosyltransferase family. QTRT2 subfamily.
    
 0.565
V497_02462
Thioredoxin domain-containing protein.
    
 0.565
V497_04488
Protein disulfide-isomerase.
    
 0.565
Your Current Organism:
Pseudogymnoascus sp. VKMF4516
NCBI taxonomy Id: 1420910
Other names: P. sp. VKM F-4516 (FW-969), Pseudogymnoascus sp. VKM F-4516 (FW-969)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.