STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V500_09966Uncharacterized protein. (1222 aa)    
Predicted Functional Partners:
V500_10845
Ribonuclease P protein subunit.
   
 0.998
V500_09526
Uncharacterized protein.
  
 0.998
V500_08861
Uncharacterized protein.
   
 0.998
V500_11172
Uncharacterized protein.
    
 0.997
V500_07115
Uncharacterized protein.
   
 0.994
V500_01328
Uncharacterized protein.
    
 0.991
V500_08232
Uncharacterized protein.
   
 0.987
V500_00444
Uncharacterized protein.
   
 0.976
V500_03974
Uncharacterized protein.
   
 0.976
V500_02493
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.964
Your Current Organism:
Pseudogymnoascus sp. VKMF4518
NCBI taxonomy Id: 1420913
Other names: P. sp. VKM F-4518 (FW-2643), Pseudogymnoascus sp. VKM F-4518 (FW-2643)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.