STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V500_07189Uncharacterized protein. (612 aa)    
Predicted Functional Partners:
V500_02111
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
   
 0.727
V500_10319
Uncharacterized protein.
    
 0.722
V500_10691
Uncharacterized protein.
   
   0.494
V500_05865
FSH1 domain-containing protein.
   
    0.453
V500_02433
Uncharacterized protein.
    
  0.433
V500_10855
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
     
 0.409
Your Current Organism:
Pseudogymnoascus sp. VKMF4518
NCBI taxonomy Id: 1420913
Other names: P. sp. VKM F-4518 (FW-2643), Pseudogymnoascus sp. VKM F-4518 (FW-2643)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.